Targeted capture in evolutionary and ecological genomics
… affixed to an array and used to capture homologous sequences for … , targeted capture can
be used to anchor anonymous genetic … and detecting population-level signatures of selection), …
be used to anchor anonymous genetic … and detecting population-level signatures of selection), …
Scaling up: A guide to high‐throughput genomic approaches for biodiversity analysis
TM Porter, M Hajibabaei - Molecular ecology, 2018 - Wiley Online Library
… anonymous DNA sequences has been accumulating in … as sequence variation within and
among species varies across taxa… of the genome to be captured, increasing the DNA sequence …
among species varies across taxa… of the genome to be captured, increasing the DNA sequence …
Genomic signature of Fanconi anaemia DNA repair pathway deficiency in cancer
… DNA was captured on a Qiagen Genomic Tip column, washed, and eluted by gravity flow. …
any platform-specific bias, we ran this analysis on both WGS and genome-wide CNV array …
any platform-specific bias, we ran this analysis on both WGS and genome-wide CNV array …
Genetic and genomic monitoring with minimally invasive sampling methods
… use of custom biotin-tagged RNA baits to capture genomic … SNP array platforms have
proprietary software packages that … changes in DNA or RNA abundance or sequence change, …
proprietary software packages that … changes in DNA or RNA abundance or sequence change, …
Genotyping and sequencing technologies in population genetics and genomics
… In addition, AFLPs reflect anonymous restriction sites, which are … Screening sequence
variation in the mitochondrial control … all available platforms have moved toward solution capture, …
variation in the mitochondrial control … all available platforms have moved toward solution capture, …
An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray
… DNA methylation with the 850 K EPIC DNA methylation array … Subtle changes are better
captured using the new L-DMR … and 6 females, all anonymous healthy donors. The donors had …
captured using the new L-DMR … and 6 females, all anonymous healthy donors. The donors had …
Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciences
C Manzoni, DA Kia, J Vandrovcova… - Briefings in …, 2018 - academic.oup.com
… that captures up to 1 kb per run; (ii) DNA-microarrays, based … to identify signature patterns,
such as DNA methylation, … and processing (eg different array or NGS platforms, differences in …
such as DNA methylation, … and processing (eg different array or NGS platforms, differences in …
Extended kinship analysis of historical remains using SNP capture
EM Gorden, EM Greytak, K Sturk-Andreaggi… - Forensic Science …, 2022 - Elsevier
… Family reference samples were genotyped using a standard SNP microarray. … using
microarray platforms (ie high quality FRS). The first SNP capture panel contained 24,999 genomic …
microarray platforms (ie high quality FRS). The first SNP capture panel contained 24,999 genomic …
Next-generation characterization of the cancer cell line encyclopedia
… expression and reverse-phase protein array data for 1,072 cell lines … of extracted signatures
to 30 COSMIC signatures, we … Therefore, we used an alternative approach to capture gene …
to 30 COSMIC signatures, we … Therefore, we used an alternative approach to capture gene …
Integrative clinical genomics of metastatic cancer
… Next, we looked at transcriptional signatures associated with … capture libraries using a
linear model with shrinkage and … to RNA-seq and major microarray platforms, (2) are highly …
linear model with shrinkage and … to RNA-seq and major microarray platforms, (2) are highly …